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Biology · Molecular Biology

DNA Concentration Calculator

Nucleic acid concentration and purity from UV absorbance.

Nucleic acid
Absorbance at 260 nm.
1 if measured neat.
For the 260/280 purity ratio.
Try a sample
Concentration
25 µg/mL

That is 25 ng/µL (µg/mL = ng/µL). Using the dsDNA factor of 50 µg/mL per A₂₆₀ unit, at 1× dilution.

Concentration by nucleic-acid type at this A₂₆₀

Nucleic acid concentration is c = A₂₆₀ × factor × dilution, where the factor is 50 for dsDNA, 33 for ssDNA, and 40 for RNA. An A₂₆₀ of 1.0 therefore ≈ 50 µg/mL of dsDNA. So dsDNA at A₂₆₀ 0.5 with no dilution gives 0.5 × 50 × 1 = 25 µg/mL (25 ng/µL).

How UV quantification works

Nucleic acids absorb ultraviolet light most strongly at 260 nm, because the aromatic bases are excellent UV chromophores. On a 1 cm path length, the absorbance at 260 nm (A₂₆₀) is directly proportional to how much nucleic acid is in the beam, so a single reading converts straight into a concentration once you apply the right conversion factor.

Each nucleic acid type absorbs a little differently, so the factor changes: double-stranded DNA uses 50, single-stranded DNA 33, and RNA 40 µg/mL per A₂₆₀ unit. Multiply by the dilution factor if you diluted the sample before reading.

c = A₂₆₀ × factor × dilution

factor = 50 (dsDNA), 33 (ssDNA), 40 (RNA) µg/mL per A₂₆₀ unit; assumes a 1 cm path length

Worked example

Total RNA read at A₂₆₀ = 1.0 after a 10× dilution:

  1. 1
    Pick the nucleic acid type. RNA uses a conversion factor of 40 µg/mL per A₂₆₀ unit.
  2. 2
    Read A₂₆₀ on a 1 cm path. The blanked reading here is A₂₆₀ = 1.0.
  3. 3
    Note the dilution factor. The sample was diluted 10× before reading, so dilution = 10.
  4. 4
    Multiply it out. c = 1.0 × 40 × 10 = 400 µg/mL, i.e. 400 ng/µL.

Conversion factors and purity targets

Standard factors for a 1 cm path length; an A₂₆₀ of 1.0 ≈ 50 µg/mL dsDNA.

Nucleic acidFactor (µg/mL per A₂₆₀)Pure A₂₆₀/A₂₈₀
dsDNA50≈ 1.8
ssDNA33≈ 1.8
RNA40≈ 2.0

Reading the result and checking purity

Units. Concentration comes out in µg/mL, which is numerically identical to ng/µL — 25 µg/mL is the same as 25 ng/µL — so you can quote whichever your protocol expects without recalculating.

The 260/280 purity check. Dividing A₂₆₀ by A₂₈₀ tests for protein and phenol contamination, which absorb near 280 nm. Pure DNA sits around 1.8 and pure RNA around 2.0; a noticeably lower ratio flags protein or phenol carryover. Many labs also check A₂₆₀/A₂₃₀ (ideally about 2.0–2.2) to catch guanidine, EDTA, or carbohydrate contamination.

Assumptions. The factors assume a standard 1 cm path length and a clean blank. Very high or very low absorbances fall outside the linear range, so dilute concentrated samples to land A₂₆₀ between roughly 0.1 and 1.0 before reading.

What does the 260/280 ratio mean?
It is A₂₆₀ divided by A₂₈₀ and gauges purity. Nucleic acids peak at 260 nm while proteins and phenol absorb near 280 nm, so a ratio around 1.8 for DNA or 2.0 for RNA indicates a clean prep. A markedly lower ratio suggests protein or phenol contamination.
Why is the factor 50 for dsDNA?
By long-standing convention an A₂₆₀ of 1.0 on a 1 cm path corresponds to about 50 µg/mL of double-stranded DNA. That empirical relationship comes from the average extinction of DNA bases, so multiplying A₂₆₀ by 50 gives the dsDNA concentration.
Why are ssDNA and RNA factors different?
Single-stranded molecules stack their bases less, so unpaired bases absorb more UV per microgram. That means a lower factor: 33 µg/mL per A₂₆₀ unit for ssDNA and 40 for RNA, versus 50 for dsDNA.
Are µg/mL and ng/µL the same number?
Yes. One µg/mL equals one ng/µL because both scale by a factor of 1000 in numerator and denominator, so the figure is identical — 400 µg/mL is 400 ng/µL. The tool shows both so you can quote whichever unit your protocol uses.
How do I apply the dilution factor?
Enter how many times you diluted the sample before reading. If you diluted 1 part sample into 9 parts buffer that is a 10× dilution, so the tool multiplies the raw concentration by 10 to recover the original stock concentration.
What A₂₆₀ range gives a reliable reading?
Spectrophotometers are most accurate when A₂₆₀ sits roughly between 0.1 and 1.0. Above that the response is no longer linear, so dilute concentrated samples until they fall in range and let the dilution factor scale the result back up.